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| Status |
Public on Jul 02, 2013 |
| Title |
Expression data from genetically engineered mouse models (GEMMs) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
3 Cell lines from Apc, p53 (AP) GEMMs were compared to 12 cell lines from Apc, Kras, p53 (AKP) GEMMs.
Mouse 430 2.0 arrays were used to determine genomic expression differences between the two genotypes (AP and AKP).
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| Overall design |
RNA was extracted from 3 AP and 10 AKP cell lines using the Qiagen RNEasy kit, and hybridized to individual Affymetrix mouse 430 2.0 chips as per manufacturer's instructions
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| Contributor(s) |
Belmont P, Xie T |
| Citation(s) |
23403635 |
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| Submission date |
Jul 22, 2012 |
| Last update date |
Feb 11, 2019 |
| Contact name |
Peter Belmont |
| E-mail(s) |
peter.belmont@pfizer.com
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| Organization name |
Pfizer Inc
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| Street address |
10724 Science Center Drive
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| City |
San Diego |
| State/province |
CA |
| ZIP/Postal code |
92121 |
| Country |
USA |
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| Platforms (1) |
| GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
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| Samples (15)
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| GSM971664 |
AKP cell line, biological rep1 |
| GSM971665 |
AKP cell line, biological rep2 |
| GSM971666 |
AKP cell line, biological rep3 |
| GSM971667 |
AKP cell line, biological rep4 |
| GSM971668 |
AKP cell line, biological rep5 |
| GSM971669 |
AKP cell line, biological rep6 |
| GSM971670 |
AKP cell line, biological rep7 |
| GSM971671 |
AKP cell line, biological rep8 |
| GSM971672 |
AKP cell line, biological rep9 |
| GSM971673 |
AKP cell line, biological rep10 |
| GSM971674 |
AKP cell line, biological rep11 |
| GSM971675 |
AKP cell line, biological rep12 |
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| Relations |
| BioProject |
PRJNA171121 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE39557.txt.gz |
18.7 Kb |
(ftp)(http) |
TXT |
| GSE39557_RAW.tar |
58.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data are available on Series record |
| Processed data included within Sample table |
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