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| Status |
Public on Aug 01, 2012 |
| Title |
H4K20me1 contributes to downregulation of X-linked genes for Caenorhabditis elegans dosage compensation |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We compared the pattern of H4K20me1 at the L3 stage in wild-type and set-4 mutants by ChIP-seq. In wild-type, H4K20me1 levels on the X chromosome are higher than on autosomes. In set-4 mutants, this difference is lost.
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| Overall design |
ChIP-seq of H4K20me1 at the L3 stage in wild-type and set-4 mutant L3 larvae.
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| Contributor(s) |
Ahringer J |
| Citation(s) |
23028348 |
| |
| Submission date |
Jul 31, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Przemyslaw Aleksander Stempor |
| Organization name |
University of Cambridge
|
| Department |
The Gurdon Institute
|
| Lab |
Ahringer Lab
|
| Street address |
Tennis Court Road
|
| City |
Cambridge |
| State/province |
United Kingdom |
| ZIP/Postal code |
CB2 1QN |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL13657 |
Illumina HiSeq 2000 (Caenorhabditis elegans) |
|
| Samples (3) |
| GSM979032 |
H4K20me1 ChIP-seq of wild-type |
| GSM979033 |
H4K20me1 ChIP-seq of set-4 mutant, rep1 |
| GSM979034 |
H4K20me1 ChIP-seq of set-4 mutant, rep2 |
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| Relations |
| BioProject |
PRJNA171711 |
| SRA |
SRP014640 |
