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Series GSE40472 Query DataSets for GSE40472
Status Public on Dec 01, 2020
Title Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 1)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genomewide H3K27me3 and H3K4me3 patterns and EZH2 binding profiles in HT and SUDHL6 cell lines by chromatin immunoprecipitation and deep sequencing (ChIP-seq).
 
Overall design Histone marks (H3K27me3, H3K4me3) and EZH2 binding by ChIP-seq in SUDHL6 and HT DLBCL cell lines.
 
Contributor(s) Trojer P, Garapaty S, Lan F, Hatton C, Bryant B
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 29, 2012
Last update date Dec 01, 2020
Contact name Barbara M Bryant
E-mail(s) barbara.bryant@constellationpharma.com
Organization name Constellation Pharmaceuticals
Street address 215 First Street
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (8)
GSM994737 HT H3K27me3
GSM994738 SUDHL6 H3K27me3
GSM994739 HT EZH2
This SubSeries is part of SuperSeries:
GSE40476 Selective lymphoma cell killing by a PRC2 small molecule inhibitor
Relations
BioProject PRJNA174126
SRA SRP015321

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40472_RAW.tar 4.5 Gb (http)(custom) TAR (of BED, TDF, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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