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Series GSE40534 Query DataSets for GSE40534
Status Public on Aug 29, 2015
Title Expression profiling in ductus arteriosus and aorta of Brown-Norway and Fischer344 rats
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Comparison of gene expression levels in ductus arteriosus (DA) and aorta in full-term (21 days) neonates of Brown-Norway (BN) and Fischer344 (F344) rats
We analyzed the fold difference between BN and F344 rats in ductus arteriosus in order to identify the down-regulated and up-regulated genes specifically in BN rat's DA. The differences in aorta was also examined for additional comparison.
 
Overall design Total RNA was extracted from aorta and DA tissues from BN and F344 rat neonates one hour after delivery, and converted to biotin-labeled cRNAs that were hybridized to Affymetrix Rat Gene 1.0 ST Array.
 
Contributor(s) Hsieh YE, Minamisawa S
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Submission date Aug 31, 2012
Last update date Aug 29, 2015
Contact name Yi-Ting Emma Hsieh
Organization name Waseda University
Street address 2-2Wakamatsu-cho, Shinjuku
City Tokyo
ZIP/Postal code 162-8480
Country Japan
 
Platforms (1)
GPL6247 [RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM995930 F344_Day01h_ductus arteriosus_rep1
GSM995931 F344_Day01h_ductus arteriosus_rep2
GSM995932 F344_Day01h_aorta_rep1
Relations
BioProject PRJNA174230

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40534_RAW.tar 32.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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