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Series GSE40708 Query DataSets for GSE40708
Status Public on Sep 10, 2012
Title microRNA-146b improves intestinal injury in mouse colitis by activating NF-kB and improving epithelial barrier function
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus
Sample organism Mus musculus
Experiment type Non-coding RNA profiling by array
Summary Aim: The precise role of microRNAs in inflammatory disease has been less clear. The present study investigated the effect of microRNA (miR-146b) on improving intestinal inflammation.

Methods: The microRNA profile in IL-10-deficient mice was examined using microRNA arrays and miR-146b was selected for the following experiments. The expression vectors containing either the whole sequence of miR-146b or its siRNA were intraperitoneally administered to the dextran sulfate sodium (DSS)-induced colitis mouse.

Results: The overexpression of miR-146b activated the NF-kB pathway, improved the epithelial barrier function, relieved intestinal inflammation in the DSS-induced colitis mice, and improved the survival rate of mice with lethal colitis. Furthermore, this amelioration of the intestinal inflammation by miR-146b was negated by the inhibitor for NF-kB pathway.

Conclusion: The modulation of miR-146b expression is a potentially useful therapy for the treatment of intestinal inflammation through the activation of the NF-kB pathway.
 
Overall design Mice: The present studies were approved by the Institutional Animal Care and Use Committee of the Asahikawa Medical College. C57BL/6 and IL-10-/- mice were purchased from Sankyo Labo Service Co., Inc. (Tokyo, Japan) and Jackson Laboratories (Bar Harbor, ME), respectively. Large intestines with or without treatments were removed, rinsed with saline, and the epithelium was gently sheared off with glass slides for protein determination.
microRNA arrays: RNA was extracted from the large intestines of mice with Trizol and then was immediately frozen in liquid nitrogen. Next, the microRNA expression profiles of large intestine in wild-type and IL-10-deficient mouse were investigated using the mirVanaTM miRNA bioarray (Filgene, Inc., Japan). Any more than 2-fold differences were considered to indicate a significant change.
 
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Submission date Sep 07, 2012
Last update date Sep 11, 2012
Contact name Mikihiro Fujiya
Organization name Asahikawa Medical University
Department Department of Medicine
Lab Division of Gastroenterology and Hematology / Oncology
Street address 1-1-1, Higashi 2-jou, Midorigaoka
City Asahikawa-city
State/province Hokkaido
ZIP/Postal code 078-8510
Country Japan
 
Platforms (1)
GPL5106 mirVANA miRNA Bioarray V2
Samples (2)
GSM999548 MicroRNA expression profile in the large intestine of IL-10-deficient mouse
GSM999549 MicroRNA expression profile in the large intestine of control mouse
Relations
BioProject PRJNA174740

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40708_RAW.tar 120.0 Kb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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