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Series GSE40765 Query DataSets for GSE40765
Status Public on Feb 01, 2015
Title Transcription factor Msn2 dependent gene expression in two entomopathogen fungi, Beauveria bassiana and Metarhizium robertsii under thermal and oxidaitve stresses
Organisms Beauveria bassiana; Metarhizium robertsii
Experiment type Expression profiling by high throughput sequencing
Summary Transcription factor Msn2 played crucial roles in mediating fungal stress tolerance, a determinant to the biocontrol potential of fungal entomopathogens. We characterized for the first time the functions of Beauveria bassiana Msn2 (BbMsn2) and Metarhizium robertsii (MrMsn2) by analyzing multi-phenotypic changes in Msn2-deletion and investigating transcription patterns of WT versus ΔMsn2 of B. bassiana and M. robertsii under thermal and oxidative stresses by using high throughput sequencing (RNA-Seq). Our transcriptional profiles revealed that numerous differentially expressed genes (DEGs), of which involved in transportation, detoxification, signal transduction, and energy metabolism, were significantly repressed in expression level.
 
Overall design Total RNA obtained from Bbmsn2 and MrMsn2 disruption mutant subjected to 2 mM menadione and 40 °C for 3-h response compared to the wild type strain under the same stress treatment.
 
Contributor(s) Liu Q, Feng M
Citation(s) 23466345
Submission date Sep 10, 2012
Last update date May 15, 2019
Contact name Liu Qian
E-mail(s) liu_q1@tib.cas.cn
Organization name TIB CAS
Street address Xi 7 Dao No.32 Airport Economic Area
City Tianjin
ZIP/Postal code 300308
Country China
 
Platforms (2)
GPL16038 Illumina HiSeq 2000 (Beauveria bassiana)
GPL16039 Illumina HiSeq 2000 (Metarhizium robertsii)
Samples (8)
GSM1001043 Bb2860_menadione_3h
GSM1001044 ΔBbMsn2_menadione_3h
GSM1001045 Bb2860_40°C_3h
Relations
BioProject PRJNA174866
SRA SRP015706

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40765_RAW.tar 120.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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