NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE41266 Query DataSets for GSE41266
Status Public on Mar 24, 2013
Title Comparative analysis between wild type and hap5-null mutant in response to rapamycin treatment
Organism Candida albicans
Experiment type Expression profiling by array
Summary To identify the potential Hap5-regulated genes, we treated wild type cells and hap5 mutant cells with rapamycin and their corespondent transcriptional profiles were compared. Total 608 significant genes were identified. Among them, 343 genes are upregulated in hap5 mutant in repsonse to rapamycin while 265 genes are downregulated in comparison with the wild type.
 
Overall design Rapamycin induced gene expression in wild type and hap5-null mutant was measured after 4.5 h growth in YPD followed by 0.5 h of incubation in the presence of 0.2 ug/ml rapamycin. Four independent experiments were performed for each strain.
 
Contributor(s) Hsu P, Lan C
Citation(s) 23543673
Submission date Oct 01, 2012
Last update date Oct 21, 2013
Contact name Po-Chen Hsu
E-mail(s) d9580519@oz.nthu.edu.tw
Organization name National Tsing Hua university
Department Institute of Molecular and Cellular Biology
Street address Room 404, Life Science Building I, No. 101, Section 2, Kuang-Fu Road
City Hsinchu
ZIP/Postal code 30013
Country Taiwan
 
Platforms (1)
GPL14575 Agilent-025480 Candida albicans Custom Expression Array (Feature Number version)
Samples (8)
GSM1012798 Wild type - replicate 1
GSM1012799 Wild type - replicate 2
GSM1012800 Wild type - replicate 3
Relations
BioProject PRJNA176466

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41266_RAW.tar 20.9 Mb (http)(custom) TAR (of TXT)
GSE41266_up_and_down_genes.txt.gz 84.2 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap