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Series GSE42027 Query DataSets for GSE42027
Status Public on Mar 31, 2013
Title Impact of nutrient unbalances on wine alcoholic fermentation: nitrogen excess enhances yeast cell death in lipid-limited must
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by array
Summary In this work we evaluated the impact of nutritional unbalances, as lipids/nitrogen unbalances, on wine yeast survival during alcoholic fermentation. We showed that lipids limitations (actually ergosterol limitation) lead to a rapid loss of viability during the stationary phase of fermentation but that cell death rate is strongly modulated by the amount of nitrogen sources. Yeast survival is reduced when an excess of nitrogen is available in lipid-limited fermentations. Such rapid dying yeast cells fermenting with high nitrogen level and lipids-limited amounts displayed a low storage of carbohydrate trehalose and glycogen compared to nitrogen limited cells. Consistently, examination of the cells stress response using an HSP12 promoter-driven GFP expression showed that lipids limitation triggered a weaker stress response than nitrogen limitation. We examined the involvement of nitrogen signalling pathway in the triggering of cell death using a sch9-deleted strain. We showed that deletion of SCH9 restored a high yeast viability indicating that the signaling pathway acting through Sch9p is involved in the enhanced cell death triggered by nitrogen excess. In addition we showed that various nitrogen sources provoked cell death but that histidine and proline did not trigger a similar effect. As a whole our data indicate that lipids limitation does not elicit a transcriptional program leading to a stress response which protects yeast cells and that nitrogen excess triggers cell death through a modulation of this stress response, but not by HSP12. These results point a potential negative role of nitrogen in fermentation which has until now never been described and taken into account in the management of alcoholic fermentations.
 
Overall design 2 conditions with 2 biological replicates compared: 59A and 59A-Sch9
 
Contributor(s) Tesniere C, Delobel P, Pradal M, Blondin B
Citation(s) 23658613
Submission date Nov 05, 2012
Last update date May 18, 2017
Contact name Bruno Blondin
E-mail(s) bruno.blondin@supagro.inra.fr
Organization name INRA
Department UMR1083
Lab SPO
Street address 2 place Pierre Viala
City Montpellier
ZIP/Postal code 34060
Country France
 
Platforms (1)
GPL16244 Agilent-016322 Yeast (V2) Gene Expression 8x15K Microarray (Probe Name version)
Samples (4)
GSM1030880 59A rep2
GSM1030881 sch9-deleted rep1
GSM1030882 59A rep1
Relations
BioProject PRJNA178941

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42027_RAW.tar 5.9 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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