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Series GSE42102 Query DataSets for GSE42102
Status Public on Jul 15, 2013
Title Proteomic and transcriptomic responses to thiamethoxam in the Sweetpotato whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae)
Organism Bemisia tabaci
Experiment type Expression profiling by high throughput sequencing
Summary We investigated the transcriptional response to thiamethoxam in the Bemisia tabaci using Illumina sequencing technology. A total of 1,338 genes were differently expressed in the thiamethoxam-resistant whiteflies.
 
Overall design All the B biotype whiteflies were maintained on cabbage. The susceptible strain (TH-S) was cultured without exposure to any chemical insecticides. Before the sample collected, almost 10,000 thiamethoxam-resistant adult whiteflies were treated with 2,000 mg/L thiamethoxam (~LC80) to eliminate the heterozygous individuals. Then the survivors were collected after 48 hours and designated as the TH-2000 sample. Then approximately 1,500 adult TH-S and TH-2000 were collected, respectively, The RNA was extracted and sequenced using Illumina HiSeq 2000.
 
Contributor(s) Yang N, Xie W, Yang X, Zhou X, Zhang Y
Citation(s) 23671574
Submission date Nov 07, 2012
Last update date May 15, 2019
Contact name Nina Yang
E-mail(s) nina809@163.com
Organization name Chinese Academy of Agricultural Sciences
Street address 12 Zhongguancun Nandajie, Haidian District
City Beijing
State/province Beijing
ZIP/Postal code 100081
Country China
 
Platforms (1)
GPL16220 Illumina HiSeq 2000 (Bemisia tabaci)
Samples (2)
GSM1032556 TH-S
GSM1032557 TH-2000
Relations
BioProject PRJNA179139
SRA SRP017106

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42102_RAW.tar 2.5 Mb (http)(custom) TAR (of TXT)
GSE42102_transcript_IDs.fa.gz 22.2 Mb (ftp)(http) FA
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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