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Series GSE42212 Query DataSets for GSE42212
Status Public on Jul 24, 2013
Title Quantitative analysis of proliferative and Ras-induced senescent human primary fibroblasts transcriptomes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goals of this study is to analyse transcriptionnal changes in senescent cells and to compare them with ChIPseq data for several histones marks and proteins of the SUMO machinery
 
Overall design mRNA profiling of proliferative versus Ras-induced senescent humain primary fibroblasts 5 days post-infection
 
Contributor(s) Neyret-Kahn H, Benhamed M, Ye T, Le Gras S, Lapaquette P, Ouspenskaia M, Dasso M, Seeler J, Davidson I, Dejean A
Citation(s) 23893515
Submission date Nov 09, 2012
Last update date May 15, 2019
Contact name Tao YE
Organization name IGBMC (CNRS/INSERM/UDS)
Street address 1 rue Laurent Fries
City Illkirch
ZIP/Postal code 67404
Country France
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (6)
GSM1035443 Proliferatives_rep1_RNAseq
GSM1035444 Proliferatives_rep2_RNAseq
GSM1035445 Proliferatives_rep3_RNAseq
This SubSeries is part of SuperSeries:
GSE42213 SUMO is an Integral and Instructive Component of Chromatin in Cell Growth and Senescence
Relations
BioProject PRJNA179305
SRA SRP017142

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42212_RNASeq_RPKM.txt.gz 11.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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