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Series GSE42594 Query DataSets for GSE42594
Status Public on Dec 15, 2012
Title cis-Regulation of Shh-directed neural pattering
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 23249739
Submission date Nov 28, 2012
Last update date May 16, 2019
Contact name Kevin Peterson
Phone 323-442-8077
Organization name Eli and Edythe Broad-CIRM Center for Regenerative Medicine, University of Southern California Keck School of Medicine
Department Department of Stem Cell Biology and Regenerative Medicine
Lab Andrew McMahon
Street address 1425 San Pablo St.
City Los Angeles
State/province CA
ZIP/Postal code 90033
Country USA
Platforms (4)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
GPL9185 Illumina Genome Analyzer (Mus musculus)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (16)
GSM1033095 Gli1FLAG
GSM1033096 Sox2-72h-SAG
GSM1033097 YFP- (mock)
This SuperSeries is composed of the following SubSeries:
GSE42132 ChIP-seq analysis of Gli1 and Sox2 input to neural progenitor program and integration with actve histone marks
GSE42565 Transcriptional responses to Sonic Hedgehog pathway stimulation in in vitro derived neural progenitors
BioProject PRJNA182328

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42594_RAW.tar 854.3 Mb (http)(custom) TAR (of BED, CEL, TSV)
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