|
| Status |
Public on May 21, 2013 |
| Title |
Legionella pneumophila transcriptomic response of hfq mutant during post-exponential phase |
| Platform organism |
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 |
| Sample organism |
Legionella pneumophila |
| Experiment type |
Expression profiling by array
|
| Summary |
Legionella pneumophila wild-type and hfq mutant were grown to post-exponential. The wild-type strain is used as the control.
|
| |
|
| Overall design |
Two strains: wild-type (control) and hfq mutant (test). Three biological replicates. Ch1 is gDNA, use as a reference channel (Talaat, 2002, NAR)
|
| |
|
| Contributor(s) |
Trigui H, Dudyk P, Sum J, Shuman HA, Faucher SP |
| Citation(s) |
23728622 |
| |
| Submission date |
Dec 13, 2012 |
| Last update date |
Aug 26, 2013 |
| Contact name |
Sebastien Faucher |
| E-mail(s) |
sebastien.faucher@gmail.com
|
| Phone |
514-398-7886
|
| Organization name |
McGill University
|
| Department |
Natural Resource Sciences
|
| Lab |
Faucher
|
| Street address |
21,111 Lakeshore
|
| City |
St-Anne-de-Bellevue |
| State/province |
QC |
| ZIP/Postal code |
H9X 3V9 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL7283 |
CGC Legionella whole-genome microarray v1.0 |
|
| Samples (6)
|
| GSM1053154 |
Control Legionella pneumophila wild-type Replicate 1 |
| GSM1053155 |
Control Legionella pneumophila wild-type Replicate 2 |
| GSM1053156 |
Control Legionella pneumophila wild-type Replicate 3 |
| GSM1053157 |
Test Legionella pneumophila hfq mutant Replicate 1 |
| GSM1053158 |
Test Legionella pneumophila hfq mutant Replicate 2 |
| GSM1053159 |
Test Legionella pneumophila hfq mutant Replicate 3 |
|
| Relations |
| BioProject |
PRJNA183836 |
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