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Series GSE43334 Query DataSets for GSE43334
Status Public on Dec 31, 2013
Title hCAF1/CNOT7 regulates interferon signaling by targeting STAT1
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Stringent regulation of the interferon signaling pathway is essential for maintaining the immune response to pathogens and tumors. The transcription factor STAT1 is a crucial mediator of this response. Here we show that hCAF1/CNOT7 regulates class I and II interferon pathways at different crucial steps. In resting cells hCAF1 can control STAT1 trafficking by interacting with the latent form of STAT1 in the cytoplasm. IFN treatment induces STAT1 release, suggesting that hCAF1 may shield cytoplasmic STAT1 from undesirable stimulation. Consistent, hCAF1 silencing enhances STAT1 basal promoter occupancy associated with increased expression of a subset of STAT1-regulated genes. Consequently, hCAF1 knockdown cells exhibit an increased protection against viral infection and reduced viral replication. Furthermore, hCAF1 participates in the extinction of the IFN signal, through its deadenylase activity, by speeding up the degradation of some STAT1-regulated mRNAs. Since abnormal and unbalanced JAK/STAT activation is associated with immune disorders and cancer, hCAF1 could play a major role in innate immunity and oncogenesis, contributing to tumor escape.
 
Overall design mRNAs from cells expressing the siRNA siRNA duplexes targeting hCAF1, corresponding to the coding region 941-961 (kd) (hCAF1 NCBI Reference Sequence: NM_013354.5) and one non-targeting control siRNA (mock).
 
Contributor(s) Chapat C, Kolytcheff C, Le Romancer M, Auboeuf D, de la Grange P, Chettab K, Sentis S, Corbo L
Citation(s) 23386060
Submission date Jan 08, 2013
Last update date Feb 18, 2019
Contact name Pierre de la Grange
E-mail(s) pierre.delagrange@genosplice.com
Organization name GenoSplice technology
Department Paris Biotech Santé
Street address 29, rue du Faubourg Saint-Jacques
City Paris
ZIP/Postal code 75014
Country France
 
Platforms (2)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
GPL5188 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
Samples (12)
GSM1060648 siCTRL_1
GSM1060649 siCTRL_2
GSM1060650 siCTRL_3
Relations
BioProject PRJNA185473

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Supplementary file Size Download File type/resource
GSE43334_RAW.tar 265.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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