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Series GSE44176 Query DataSets for GSE44176
Status Public on Apr 04, 2013
Title Genome wide binding of Insensitive in w[1118] embryos
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq for Drosophila Insensitive, together with IgG control. Chromatin extracted from 2.5-6h w[1118] embryos and 6.5-12h w[1118] embryos.
 
Overall design Samples from two time points were analyzed: 2.5-6h embryos and 6.5-12h embryos. In each time point there is one Insv ChIP sample and one IgG control sample.
 
Contributor(s) Westholm J, Dai Q, Lai E
Citation(s) 23468431
Submission date Feb 08, 2013
Last update date Aug 11, 2017
Contact name Jakub Orzechowski Westholm
E-mail(s) orzechoj@mskcc.org
Organization name Memorial Sloan-Kettering Cancer Center
Department Developmental Biology
Lab Eric Lai
Street address 1275 York Avenue, Box 252
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL9061 Illumina Genome Analyzer II (Drosophila melanogaster)
Samples (4)
GSM1080115 Insv ChIP, 2.5-6h
GSM1080116 Insv ChIP, 6.5-12h
GSM1080117 IgG, 2.5-6h
This SubSeries is part of SuperSeries:
GSE44178 The BEN domain is a novel sequence-specific DNA binding domain conserved in neural transcriptional repressors
Relations
BioProject PRJNA188961

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44176_RAW.tar 607.2 Mb (http)(custom) TAR (of BED, FASTA)
Raw data provided as supplementary file
Processed data provided as supplementary file

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