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Series GSE44423 Query DataSets for GSE44423
Status Public on Dec 31, 2017
Title Microarray global microRNA expression of donor cells, fibroblast-derived iPSC, and stromal-primed cord-blood iPSC
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Global microRNA analysis of (a) human embryonic stem cells, (b) low passage episomal stromal-primed myeloid iPSC, (c) intermediate passage fibroblast iPSC, and (d) samples of corresponding donor cells.
Overall design Human miRNA Microarray Kit Version 3 kits (Agilent Technologies, Santa Clara, CA) were used for microarray assays to examine the global microRNA expression of human ES cells, iPS cells and target cell populations. The Human miRNA Microarray contains probes for 866 human microRNAs from the Sanger database v12.0. Total RNA was harvested from indicated donor cells, hESC, or iPSC, and prepared as described in the miRNeasy Mini Kit (Qiagen) with on-column DNase I digestion. A single sample of each cell line was used for this analysis.
Contributor(s) Park TS, Huo JS, Talbot CC, Yu W, Verma K, Peters A, Reijo-Pera R, Zambidis ET
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Submission date Feb 20, 2013
Last update date Mar 14, 2018
Contact name Elias Thomas Zambidis
Organization name Johns Hopkins School of Medicine
Department Oncology
Street address 733 N. Broadway
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
Platforms (1)
GPL10850 Agilent-021827 Human miRNA Microarray (V3) (miRBase release 12.0 miRNA ID version)
Samples (21)
GSM1084884 Fetal Fibroblasts
GSM1084885 Adult keratinocytes
GSM1084886 Fetal Liver CD34+ progenitors
This SubSeries is part of SuperSeries:
GSE82233 Quality of reprogramming to induced pluripotency as a function of reprogramming method
BioProject PRJNA189959

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44423_RAW.tar 37.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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