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Series GSE44553 Query DataSets for GSE44553
Status Public on Apr 23, 2013
Title RNA-sequencing technology identifies specific genes expressed in the ICM of mouse embryos
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq data from whole mouse embryos at E3.75 (stage where the three cell types: TE, PrE and EPI are well resolved) and from dissected ICMs in order to identify genes expressed specifically in the ICM
 
Overall design We used E3.75 whole mouse embryos at the blastocyst stage and immunosurgically dissected ICMs for RNA extraction and sequencing
 
Contributor(s) Aksoy I, W Stanton L
Citation(s) 23474895
Submission date Feb 21, 2013
Last update date May 15, 2019
Contact name Irene Aksoy
E-mail(s) irene.aksoy@inserm.fr
Organization name Stem Cell and Brain Research Institute
Street address 18 avenue du Doyen Lepine
City Lyon
ZIP/Postal code 69500
Country France
 
Platforms (1)
GPL9318 AB SOLiD System 3.0 (Mus musculus)
Samples (2)
GSM1086357 E3.75 blastocyst
GSM1086358 E3.75 ICM
Relations
SRA SRP018801
BioProject PRJNA190711

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44553_RPKM.txt.gz 297.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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