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Series GSE45298 Query DataSets for GSE45298
Status Public on Mar 26, 2013
Title RNA-seq analysis of Xenorhabdus nematophila
Organism Xenorhabdus nematophila
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Analysis of size selected RNA samples to identify sRNAs using wild-type and rpoS mutant strains.
 
Overall design Four experiments, two from each of two strains using two protocols.
 
Contributor(s) Goodrich-Blair H, Lu X, Tjaden B
Citation(s) 21768221
Submission date Mar 19, 2013
Last update date May 15, 2019
Contact name Brian Tjaden
Organization name Wellesley College
Street address 106 Central Street
City Wellesley
State/province MA
ZIP/Postal code 02481
Country USA
 
Platforms (1)
GPL16821 Illumina Genome Analyzer II (Xenorhabdus nematophila)
Samples (4)
GSM1101765 WT
GSM1101766 rpoS mutant
GSM1101767 WT protocol 1.5
Relations
SRA SRP019788
BioProject PRJNA194148

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45298_Operons.txt.gz 15.3 Kb (ftp)(http) TXT
GSE45298_Summary.txt.gz 688 b (ftp)(http) TXT
GSE45298_Transcripts.txt.gz 130.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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