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| Status |
Public on Jun 23, 2013 |
| Title |
Differences in gastric carcinoma microenvironment stratify according to EBV infection intensity; implications for possible immune adjuvant therapy |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Our goal of this study was to perform quantitative and global assessment of EBV gene expression in gastric carcinomas and assess EBV associated cellular pathway alterations.
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| Overall design |
Examination of a gastric carcinoma cell line naturally infected with EBV, SNU-719 using poly-A and ribodepletion RNA-seq data sets
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| Contributor(s) |
Strong MJ, Xu G, Coco J, Baribault C, Vinay DS, Lacey MR, Strong AL, Lehman TA, Seddon MB, Lin Z, Concha M, Baddoo M, Ferris M, Swan KF, Sullivan DE, Burow ME, Taylor CM, Flemington EK |
| Citation(s) |
23671415, 26178981 |
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| Submission date |
Mar 24, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Erik K Flemington |
| E-mail(s) |
eflemin@tulane.edu
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| Phone |
504 988-1167
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| Organization name |
Tulane Health Sciences Center
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| Department |
Pathology
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| Street address |
1430 Tulane Ave., SL79
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| City |
New Orleans |
| State/province |
LA |
| ZIP/Postal code |
70112 |
| Country |
USA |
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| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA194069 |
| SRA |
SRP019961 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE45453_RAW.tar |
380.0 Kb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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