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Series GSE45563 Query DataSets for GSE45563
Status Public on Mar 22, 2016
Title Drought, heat and combined stress in durum wheat
Platform organism Triticum aestivum
Sample organism Triticum turgidum subsp. durum
Experiment type Expression profiling by array
Summary Durum wheat is an important cereal crop grown mainly in semi-arid environments (e.g. Mediterranean regions) characterized by water scarcity and high temperatures often occurring at the same time. This work reports on a transcriptomic analysis carried out on two durum wheat cultivars (Cappelli and Ofanto) characterized by different water use efficiency (WUE), grown to booting stage and subjected to a combination of drought and heat stresses, a situation similar to the experience of a crop grown in Mediterranean environments and exposed to a terminal heat/drought stress. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, alessio. The equivalent experiment is TA47 at PLEXdb.]
 
Overall design treatment: CTRL - genotype: Ofanto(3-replications); treatment: CTRL - genotype: Cappelli(3-replications); treatment: Drought - genotype: Ofanto(3-replications); treatment: Drought - genotype: Cappelli(3-replications); treatment: Heat - genotype: Ofanto(3-replications); treatment: Heat - genotype: Cappelli(3-replications); treatment: Mixed - genotype: Ofanto(3-replications); treatment: Mixed - genotype: Cappelli(3-replications)
Web link http://www.plexdb.org/modules/PD_browse/experiment_browser.php?experiment=TA47
 
Contributor(s) aprile a, De Bellis L
Citation(s) 24267539
Submission date Mar 27, 2013
Last update date Dec 04, 2018
Contact name PLEXdb Curator, Sudhansu Dash
Organization name Iowa State University
Department Virtual Reality Application Center
Lab PLEXdb
Street address 1023 Crop Genomes Informatics Lab (Iowa State University)
City Ames
State/province IA
ZIP/Postal code 50011
Country USA
 
Platforms (1)
GPL3802 [wheat] Affymetrix Wheat Genome Array
Samples (24)
GSM1109769 treatment: CTRL - genotype: Ofanto - rep1
GSM1109770 treatment: CTRL - genotype: Ofanto - rep2
GSM1109771 treatment: CTRL - genotype: Ofanto - rep3
Relations
BioProject PRJNA194580

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45563_RAW.tar 185.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
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