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Series GSE45683 Query DataSets for GSE45683
Status Public on Dec 31, 2013
Title Homarus americanus larval development and metamorphosis
Organism Homarus americanus
Experiment type Expression profiling by array
Summary Transcriptional profiling of larval stage I - IV of Homarus americanus, for assessment of stage specific developmental gene expression. Individuals from each stage were gathered in July of 2009 and 2010. A reference design was used to permit comparison of all stages. Study aims included assessment of global gene expression of larval development of healthy larvae, and identifying novel molecular pathways involved in H. americanus development.
 
Overall design Four condition experiment, stage I - IV individuals: 10 biological replicates per stage. Stages collected independantly from each other; sampling conducted over 2 seasons. Reference sample prepared from pooled RNA of 4 individuals per stage.
 
Contributor(s) Hines DJ, Clark KF, Greenwood SJ
Citation Hines DJ, Clark KF, Greenwood SJ. Global gene expression profiling of Homarus americanus (Crustacea) larval stages during development and metamorphosis. Invertebrate Reproduction and Development 2014; 58(2):97-107. doi:10.1080/07924259.2013.834278
Submission date Apr 01, 2013
Last update date Apr 06, 2014
Contact name Dan Hines
E-mail(s) dhines@upei.ca
Organization name AVCLSC
Street address 550 University Ave
City Charlottetown
State/province PE
ZIP/Postal code C1A 4P3
Country Canada
 
Platforms (1)
GPL16931 Homarus americanus 15K array v2.1 (oligo ID version)
Samples (40)
GSM1111873 Stage I 2009 replicate 1
GSM1111874 Stage I 2009 replicate 2
GSM1111875 Stage I 2010 replicate 1
Relations
BioProject PRJNA195602

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45683_RAW.tar 53.4 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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