|
| Status |
Public on Jun 01, 2015 |
| Title |
Thermospermine-induced transcriptomic changes in Populus stem |
| Platform organism |
Populus sp. |
| Sample organism |
Populus tremula x Populus tremuloides |
| Experiment type |
Expression profiling by array
|
| Summary |
Thermospermine-induced transcriptomic changes were explored in Populus tremula x P. tremuloides. Transgenic hybrid aspen plants expressing 35S::POPACAULIS5 were compared to wild-type hybrid aspen under the influence of PGRs and depleted from PGRs.
|
| |
|
| Overall design |
Total RNAs from stem tissues of transgenic plants carrying 35S::POPACAULIS5 either grown on auxin-containing and -depleted media were compared to wild-type grown also under the both conditions. Three biological replicates for each pair genotype/growth condition were performed.
|
| |
|
| Contributor(s) |
Milhinhos A, Matos A, Miguel CM |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Apr 08, 2013 |
| Last update date |
Jun 01, 2015 |
| Contact name |
Ana Milhinhos |
| E-mail(s) |
milhinho@itqb.unl.pt
|
| Phone |
00351214469627
|
| Organization name |
IBET ITQB-UNL
|
| Department |
Plant Sciences
|
| Lab |
Forest Biotech Lab
|
| Street address |
Av Republica EAN Oeiras
|
| City |
Oeiras |
| State/province |
Select a State or Province |
| ZIP/Postal code |
2780 |
| Country |
Portugal |
| |
|
| Platforms (1) |
| GPL4359 |
[Poplar] Affymetrix Poplar Genome Array |
|
| Samples (12)
|
| GSM1118018 |
WT stems, MS6 media - Biological Replicate 1 |
| GSM1118019 |
WT stems, MS6 media - Biological Replicate 2 |
| GSM1118020 |
WT stems, MS6 media - Biological Replicate 3 |
| GSM1118021 |
35S::POPACAULIS5 stems, MS6 media - Biological Replicate 1 |
| GSM1118022 |
35S::POPACAULIS5 stems, MS6 media - Biological Replicate 2 |
| GSM1118023 |
35S::POPACAULIS5 stems, MS6 media - Biological Replicate 3 |
| GSM1118024 |
WT stems, MS2 media - Biological Replicate 1 |
| GSM1118025 |
WT stems, MS2 media - Biological Replicate 2 |
| GSM1118026 |
WT stems, MS2 media - Biological Replicate 3 |
| GSM1118027 |
35S::POPACAULIS5 stems, MS2 media - Biological Replicate 1 |
| GSM1118028 |
35S::POPACAULIS5 stems, MS2 media - Biological Replicate 2 |
| GSM1118029 |
35S::POPACAULIS5 stems, MS2 media - Biological Replicate 3 |
|
| Relations |
| BioProject |
PRJNA196529 |
Less...
More...