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Series GSE46262 Query DataSets for GSE46262
Status Public on Feb 24, 2016
Title Studies on progenitor endothelial cells; exploring mechanisms for improvement of cardiovascular diseases
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transcriptomic analysis of primary CD34+ cells. CD34+ cell were induced in vitro with hypoxia (3 hours), high glucose and high glucose plus hypoxia. Subsequently, the effect of metformin (anti-diabetic drug) on all conditions was studied to take advantage of transcriptomics to prospectively explore the mechanism of this drug to reduce the risk of cardiovascular diseases in type II diabetic patients.
 
Overall design Total RNA isolated from 20 samples; 10 different conditions each has 2 repeats; labeled, and hybridized to Affymetrix Human Gene 1.0 ST Array.
 
Contributor(s) Bakhashab S, Weaver J, Spyridopoulos I, Schulten H, Manikandan J, Lary S, Ahmed F, Alqahtani MH
Citation(s) 26861446
Submission date Apr 22, 2013
Last update date Jul 26, 2018
Contact name Sherin Bakhashab
E-mail(s) sbakhashab@kau.edu.sa
Organization name King Abdulaziz University
Department Biochemistry
Street address Abdullah Sulyman
City Jeddah
ZIP/Postal code 21589
Country Saudi Arabia
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (20)
GSM1127773 CD34+ 5.5mM Glu_rep1
GSM1127774 CD34+ 5.5mM Glu_rep2
GSM1127775 CD34+ 5.5mM+Met_rep1
Relations
BioProject PRJNA198490

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46262_RAW.tar 82.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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