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| Status |
Public on Dec 13, 2013 |
| Title |
Differences in the global transcriptome between high- and low-pathogenic Salmonella Enteritidis strains |
| Organism |
Salmonella enterica subsp. enterica serovar Enteritidis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the use of RNA-Seq technique to characterize differences in the global transcritome between multiple genetically similar but phenotypically diverse poultry-associated field strains of S. Enteritidis grown in laboratory media at avian body temperature (42°C).
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| |
|
| Overall design |
Characterization and comparison of transcriptome of six S. Enteritidis strains previously identified as high-pathogenic (HP, n=3) and low-pathogenic (LP, n=3)
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| |
|
| Contributor(s) |
Shah DH |
| Citation(s) |
24271167 |
| |
| Submission date |
Apr 25, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Devendra H Shah |
| E-mail(s) |
dshah@wsu.edu
|
| Phone |
509-335-6071
|
| Organization name |
Washington State University
|
| Department |
Veterinary Microbiology and Pathology
|
| Lab |
Shah Lab
|
| Street address |
#402, Bustad Hall
|
| City |
Pullman |
| State/province |
WA |
| ZIP/Postal code |
99163 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17074 |
Illumina HiSeq 2000 (Salmonella enterica subsp. enterica serovar Enteritidis) |
|
| Samples (6)
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|
| Relations |
| BioProject |
PRJNA198913 |
| SRA |
SRP021526 |
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