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Series GSE46571 Query DataSets for GSE46571
Status Public on May 01, 2014
Title CD133+ and CD133- expression from pancreatic cancer cell line KPC001 using mouse WGA
Organism Mus musculus
Experiment type Expression profiling by array
Summary CD133+ and CD133 negative cells from pancreatic cancer cell line KPC001 were sorted using MACS technique. RNA was isolated using trizol (Invitrogen) and cleaned up using Qiagen RNAeasy columns. The RNA passed QC by the Biomedical Genomic Center (BMGC) of University of Minnesota. cDNA was prepared and hybridized by BMGC according to standard protocol.
 
Overall design The goal of the experiment was to see changes in the expression of genes in the CD133+ vs CD133- population in the pancreatic cancer cell line derived from KPC mouse model.
 
Contributor(s) Banerjee S, Saluja A
Citation(s) 24634377
Submission date May 02, 2013
Last update date Jan 16, 2019
Contact name Sulagna Banerjee
E-mail(s) sulagna.banerjee@gmail.com
Organization name University of Minnesota
Department Surgery
Street address 515 Delaware Street SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (6)
GSM1132615 CD133-
GSM1132616 CD133+
GSM1132617 CD133-_2
Relations
BioProject PRJNA201019

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46571_RAW.tar 15.8 Mb (http)(custom) TAR
GSE46571_non-normalized.txt.gz 3.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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