NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE46733 Query DataSets for GSE46733
Status Public on May 09, 2013
Title SNP genotyping analyses for the Chinese indigenous pig breeds and commercial pig breeds
Organism Sus scrofa
Experiment type SNP genotyping by SNP array
Summary Genome-wide SNP genotyping array can genotyped SNP highthroughly.
It can be used in many aspects, such as phylogeny relationships, genome-wide association studies, copy number identification.
 
Overall design 9 Chinese indigenous pig, 4 commercial pigs and 1 wild pig were genotyped by PorcineSNP60 array (Illumina) for exploring the phylogeny relationships among them.
 
Contributor(s) Liu J, Wang J, Jiang J
Citation(s) 23935880, 25023178
Submission date May 08, 2013
Last update date Jan 30, 2020
Contact name Huimin Kang
E-mail(s) nongdaxiaokang@126.com
Phone 18810882762
Organization name China Agriculture University
Street address Beijing
City Beijing
State/province Beijing
ZIP/Postal code 100193
Country China
 
Platforms (1)
GPL11379 Illumina Porcine SNP60 BeadChip (WG-410)
Samples (14)
GSM1136290 M2
GSM1136291 DN1
GSM1136292 MS7
Relations
BioProject PRJNA202205

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46733_signal_intensities.txt.gz 8.3 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap