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Series GSE47002 Query DataSets for GSE47002
Status Public on Jul 24, 2013
Title Transcriptome comparison of murine wild-type and dumbo retinas at P15
Organism Mus musculus
Experiment type Expression profiling by array
Summary Hmx1 is a transcription factor expressed in the developing eye and ear and in some other parts of the nervous system. Dumbo mice are carrying the Hmx1 p.Q64X loss-of-function mutation (Munroe et al., 2009. BMC Developmental Biology). Transcriptomic analyses of this mouse model allows to decipher biological pathways under the control of Hmx1. In our study, we used it to better understand the role of Hmx1 in the retina and to identify several of its target genes.
 
Overall design Wild-type and dumbo mice were maintained in a 12-hours light/12-hours dark cycle with free access to food and water. Animals were sacrified at P15 for retina isolation and RNA extraction.
 
Contributor(s) Boulling A, Schorderet DF
Citation(s) 23946633
Submission date May 16, 2013
Last update date Mar 04, 2019
Contact name Arnaud Boulling
E-mail(s) arnaud.boulling@hotmail.fr
Phone +4127 205 79 00
Organization name Institute for Research in Ophthalmology
Street address Avenue de Grand-Champsec 64
City SION
ZIP/Postal code 1950
Country Switzerland
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM1142793 Dumbo retina, biological rep1
GSM1142794 Dumbo retina, biological rep2
GSM1142795 Dumbo retina, biological rep3
Relations
BioProject PRJNA203262

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47002_Matrix_KOdumbo_vs_WT.txt.gz 6.0 Mb (ftp)(http) TXT
GSE47002_RAW.tar 35.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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