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| Status |
Public on Jun 15, 2013 |
| Title |
mRNA sequencing identifies differential gene expresssion profiles between ASCC3 knock-down cells and control cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We sequenced mRNAs from HeLa cells transduced with either scrambled shRNA or shRNA targeting ASCC3. The results have shown differential gene expression in ASCC3 knockdown cells, suggesting a regulatory role for ASCC3 in certain cellular pathway.
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| Overall design |
mRNA from HeLa cells transduced with either scrambled shRNA (ni) or shRNA targeting ASCC3 (ai) were harvested and used for deep sequencing by Illumina HiSeq 2000 sequencing instruments.
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| Contributor(s) |
Li J, Chen K |
| Citation missing |
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| |
| Submission date |
May 27, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Jianqing Li |
| Organization name |
Washington University in St. Louis, School of Medicine
|
| Department |
Molecular Microbiology
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| Lab |
Dr. Michael Diamond
|
| Street address |
660 S Euclid Ave.
|
| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63110 |
| Country |
USA |
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| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA205531 |
| SRA |
SRP023199 |
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