NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE47455 Query DataSets for GSE47455
Status Public on Sep 01, 2013
Title Analysis of change in circulating microRNAs in mice during breast tumor development
Platform organism Homo sapiens
Sample organism Mus musculus
Experiment type Non-coding RNA profiling by array
Summary The aim of this study was to analyse alterations in circulating microRNA expression during breast tumour progression in a murine model, and to apply significantly altered miRNAs to patient samples to identify novel circulating microRNA markers or tumour progression. Athymic nude mice (n=10) received an injection of 2 x 105 MDA-MB-231 cells. Tumour volume was monitored weekly and blood sampling performed at weeks 1 and 6 following tumour induction. A microRNA array was performed comparing circulating 384 microRNAs in animals with early (week 1, n=5) versus late (week 6, n=5) disease.
 
Overall design Five animals were included in the study (n=2 samples from each, total n=10 microArrays performed), with whole blood sampled one week following tumor induction and again at 6 weeks in the presence of established disease. The change in microRNA profile was then compared at week 1 and week 6, which the "early" sample providing the baseline measurements for each animal.
 
Contributor(s) Dwyer RM
Citation(s) 24626163
Submission date May 29, 2013
Last update date Sep 08, 2014
Contact name Róisín M Dwyer
Organization name National University of Ireland Galway
Street address Costelloe Road
City Galway
ZIP/Postal code Galway
Country Ireland
 
Platforms (1)
GPL17214 Human Array MicroRNA Card A v2
Samples (10)
GSM1149898 Blood_tumour induction_week1 [SAMPLE 101]
GSM1149899 Blood_tumour induction_week6 [SAMPLE 106]
GSM1149900 Blood_tumour induction_week1 [SAMPLE 201]
Relations
BioProject PRJNA205636

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47455.txt.gz 4.2 Kb (ftp)(http) TXT
GSE47455_RAW.tar 180.0 Kb (http)(custom) TAR (of XLS, XLSX)
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap