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Series GSE47908 Query DataSets for GSE47908
Status Public on Dec 31, 2014
Title Transcriptional analysis of left-sided colitis, pancolitis and ulcerative colitis-associated dysplasia
Organism Homo sapiens
Experiment type Expression profiling by array
Summary This study characterizes the inflammatory processes in left-sided colitis, pancolitis, and UC-associated dysplasia at the transcriptional level in colonics biopsies in order to identify potential biomarkers and transcripts of importance for the carcinogenic behaviour of chronic inflammation
 
Overall design Colonic biopsies were obtained from forty-five patients with UC (20 left-sided colitis, 19 pancolitis, and 6 UC-associated dysplasia) and 15 controls. The Affymetrix GeneChip Human Genome U133 Plus 2.0 was used
 
Contributor(s) Bjerrum JT, Nielsen OH, Riis LB, Pittet V, Mueller C, Rogler G, Olsen J
Citation(s) 25358065
Submission date Jun 13, 2013
Last update date Mar 25, 2019
Contact name Jacob Tveiten Bjerrum
E-mail(s) bjerrum.jacob@gmail.com
Phone +45 38681059
Organization name Herlev Hospital
Department Department of Gastroenterology, Medical Section
Street address Herlev Ringvej 75
City Herlev
ZIP/Postal code 2730
Country Denmark
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (60)
GSM1162227 colonic mucosal biopsy from Control 1
GSM1162228 colonic mucosal biopsy from Control 2
GSM1162229 colonic mucosal biopsy from Control 3
Relations
BioProject PRJNA208298

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47908_RAW.tar 414.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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