|
Status |
Public on Aug 01, 2013 |
Title |
Genome wide mapping of effects of U6atac knockdown on pre-mRNA splicing |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
This project looks into experimentally identifying all minor introns by knocking down the minor spliceosome's catalytic snRNP, U6atac.
|
|
|
Overall design |
Knockdown of U6atac by antisense morpholino followed by examining mRNA splicing by RNA-seq
|
|
|
Contributor(s) |
Younis I, dreyfuss G |
Citation(s) |
23908766 |
|
Submission date |
Jun 25, 2013 |
Last update date |
May 15, 2019 |
Contact name |
Ihab Younis |
E-mail(s) |
younis@mail.med.upenn.edu
|
Organization name |
University of Pennsylvania
|
Department |
Biochemistry and Biophysics
|
Lab |
Gideon Dreyfuss
|
Street address |
415 Curie Blvd
|
City |
philadelphia |
State/province |
PA |
ZIP/Postal code |
19104 |
Country |
USA |
|
|
Platforms (1) |
GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
Samples (2) |
|
Relations |
BioProject |
PRJNA209423 |
SRA |
SRP026297 |