NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE48410 Query DataSets for GSE48410
Status Public on Jun 29, 2013
Title Determination of Sigma 54 reglons in Bacillus thuringiensis HD73 strain
Organism Bacillus thuringiensis
Experiment type Expression profiling by array
Summary To determine Sigma 54 (SigL) reglons in Bacillus thuringiensis HD73 strain, A sigLmutant, HD(ΔsigL::kan), was constructed with insertion of kanamycin resistance gene cassete. We have employed whole genome microarray expression profiling as a discovery platform to identify the difference of gene expression between mutant and wild-type strains.
 
Overall design 2 ml samples were separately harvested from B. thuringiensis HD73 and HD(ΔsigL::kan) strains grown in Schaeffer’s sporulation medium (SSM) at stages T7 of stationary phase (7 hours after the end of the exponential phase). Three independent repeats were performed for each stain.
 
Contributor(s) Song F, Peng Q
Citation(s) 27404799, 38605001
Submission date Jun 28, 2013
Last update date Apr 16, 2024
Contact name Fuping Song
E-mail(s) fpsong@ippcaas.cn
Phone 0086-10-62896634
Organization name Instititue of plant protection, CAAS
Street address No 2 West Yuan-Ming-Yang Road
City Beijing
ZIP/Postal code 1000193
Country China
 
Platforms (1)
GPL17384 Agilent-037484 suyunjin 037483 (Probe Name version)
Samples (6)
GSM1177470 sigL mutant T7-1
GSM1177471 sigL mutant T7-2
GSM1177472 sigL mutant T7-3
Relations
BioProject PRJNA209986

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48410_RAW.tar 5.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap