|
Status |
Public on Jul 12, 2013 |
Title |
The metabolic niche of a prominent sulfate-reducing human gut bacterium |
Organisms |
[Clostridium] symbiosum; Mus musculus; Bacteroides thetaiotaomicron VPI-5482; Bacteroides ovatus ATCC 8483; Bacteroides caccae ATCC 43185; Collinsella aerofaciens ATCC 25986; Marvinbryantia formatexigens DSM 14469; Escherichia coli str. K-12 substr. MG1655; Agathobacter rectalis ATCC 33656; Desulfovibrio piger GOR1 |
Experiment type |
Expression profiling by high throughput sequencing Other
|
Summary |
This SuperSeries is composed of the SubSeries listed below.
|
|
|
Overall design |
Refer to individual Series
|
|
|
Citation(s) |
23898195 |
|
Submission date |
Jul 11, 2013 |
Last update date |
May 15, 2019 |
Contact name |
Federico E Rey |
E-mail(s) |
reyf@wustl.edu
|
Phone |
314-963-0284
|
Organization name |
Washington University
|
Department |
Pathology
|
Lab |
Gordon
|
Street address |
4444 Forest Park Blvd
|
City |
St Louis |
State/province |
MO |
ZIP/Postal code |
63108 |
Country |
USA |
|
|
Platforms (7)
|
GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
GPL17383 |
Illumina Genome Analyzer IIx (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Desulfovibrio piger GOR1; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469) |
GPL17431 |
Illumina HiSeq 2000 (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469) |
GPL17432 |
Illumina HiSeq 2000 (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Desulfovibrio piger GOR1; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469) |
GPL17433 |
Illumina MiSeq (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Desulfovibrio piger GOR1; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469) |
GPL17434 |
Illumina MiSeq (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469) |
GPL17435 |
Illumina Genome Analyzer II (Bacteroides caccae ATCC 43185; Bacteroides ovatus ATCC 8483; Bacteroides thetaiotaomicron VPI-5482; Clostridium symbiosum; Collinsella aerofaciens ATCC 25986; Desulfovibrio piger GOR1; Escherichia coli str. K-12 substr. MG1655; Eubacterium rectale ATCC 33656; Marvinbryantia formatexigens DSM 14469) |
|
Samples (135)
|
|
This SuperSeries is composed of the following SubSeries: |
GSE48409 |
The metabolic niche of a prominent sulfate-reducing human gut bacterium [1] |
GSE48807 |
The metabolic niche of a prominent sulfate-reducing human gut bacterium [2] |
GSE48808 |
The metabolic niche of a prominent sulfate-reducing human gut bacterium [3] |
|
Relations |
BioProject |
PRJNA211821 |