NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE49061 Query DataSets for GSE49061
Status Public on Jul 18, 2014
Title IF002 - Custom designed Agilent arrays result on the Cystic Fibrosis model in ferrets.
Organism Mustela putorius furo
Experiment type Expression profiling by array
Summary The goal of this study is to use newly designed ferret Agilent arrays to compare transcriptome profiles between wild type, CF3959(-/-) and CF3959(+/-) ferrets. Lung and trachea tissues from newborn and 15 day-old ferrets were RNA-extracted and subsequently analyzed by microarray.
 
Overall design Using the newly designed ferret Agilent arrays, we compared the transcriptome profiles between wild type, CF3959(-/-) and CF3959(+/-) ferrets. Samples sets: RNA from a combination of trachea and lung tissue from 4 newborn wild type ferrets and 4 newborn CF3959(-/-) ferrets. In addition, lung tissue from two 15 day-old wild type, three 15 day-old CF3959(+/-) and three 15 day-old CF3959(-/-) ferrets was RNA-extracted and subsequently analyzed by microarray.
 
Contributor(s) Katze M, Engelhardt J, Peng X, Chang J
Citation(s) 25402615
Submission date Jul 19, 2013
Last update date May 14, 2015
Contact name Michael Katze
E-mail(s) data@viromics.washington.edu
Organization name University of Washington
Department Microbiology
Lab Michael G. Katze, Ph.D
Street address Rosen Building 960 Republican St.
City Seattle
State/province WA
ZIP/Postal code 98109-4325
Country USA
 
Platforms (1)
GPL17474 Agilent-048471 ferret_Ens69_plus_mRNAseq_60k 046935
Samples (16)
GSM1193155 IF002_CF_WT_4653
GSM1193156 IF002_CF_HET_3940
GSM1193157 IF002_CF_KO_NB#2
Relations
BioProject PRJNA212789

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49061_RAW.tar 144.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap