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Series GSE49088 Query DataSets for GSE49088
Status Public on Nov 16, 2014
Title NRASG12V mediates leukemia self renewal [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mutant RAS oncoproteins activate signaling molecules that drive oncogenesis in multiple human tumors including acute myelogenous leukemia (AML). However, the specific function of these pathways in AML is unclear. To elucidate the downstream functions of activated NRAS in AML, we employed a murine model of AML harboring Mll-AF9 and NRASG12V. We found that NRASG12V enforced leukemia self-renewal gene expression signatures and was required to maintain an MLL-AF9 and MYB-dependent gene expression program. In a multiplexed analysis of RAS-dependent signaling intermediates, the leukemia stem cell compartment was preferentially sensitive to RAS withdrawal. Use of RAS-pathway inhibitors showed that NRASG12V maintained leukemia self-renewal through mTOR and MEK pathway activation, implicating these pathways as potential targets for cancer stem cell-specific therapies.
 
Overall design Mice harboring NRASG12V/Mll-AF9 AML were treated with doxycyline to abolish NRASG12V expression. Leukemia samples were harvested at 24 hour intervals after doxycyline treatment.
 
Contributor(s) Sachs Z, LaRue RS, Nguyen HT, Sachs K, Hassan NA, Diaz-Flores E, Rathe SK, Sarver AL, Bendall SC, Ha NA, Diers MD, Nolan GP, Shannon KM, Largaespada DA
Citation(s) 25316678
Submission date Jul 22, 2013
Last update date May 15, 2019
Contact name Rebecca LaRue
E-mail(s) larue005@umn.edu
Phone 612-624-0532
Organization name University of Minnesota
Department Department of Lab medicine and Pathology
Lab Minnesota Supercomputing Institute
Street address 117 Pleasant St SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM1193604 NRASG12V On
GSM1193605 NRASG12V Off 48
GSM1193606 NRASG12V Off 72
This SubSeries is part of SuperSeries:
GSE49089 NRASG12V oncogene mediates self-renewal in acute myelogenous leukemia
Relations
BioProject PRJNA212986
SRA SRP028125

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Supplementary file Size Download File type/resource
GSE49088_FPKMS_48_72_96hrs.txt.gz 205.2 Kb (ftp)(http) TXT
GSE49088_FPKMs_48hr.txt.gz 201.3 Kb (ftp)(http) TXT
GSE49088_FPKMs_72hr.txt.gz 200.8 Kb (ftp)(http) TXT
GSE49088_FPKMs_96hr.txt.gz 201.2 Kb (ftp)(http) TXT
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Processed data are available on Series record

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