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Series GSE49421 Query DataSets for GSE49421
Status Public on Jul 10, 2014
Title MethylC-Seq of idm2 single mutant and idm1idm2 double mutant
Organism Arabidopsis thaliana
Experiment type Methylation profiling by high throughput sequencing
Summary Using MethylC-Seq to provide single-base resolution of DNA methylation status in idm2 single mutant and idm1idm2 double mutant
 
Overall design MethylC-Seq: 2 mutants examined, idm2 single mutant (two biological replicates) and idm1idm2 double mutant
 
Contributor(s) Qian W, Tang K, Zhu J
Citation(s) 25002145
Submission date Jul 31, 2013
Last update date May 15, 2019
Contact name Jian-Kang Zhu
E-mail(s) zhu132@purdue.edu
Organization name Purdue University
Department Department of Horticulture and Landscape Architecture
Street address 625 Agriculture Mall Dr.
City West Lafayette
State/province IN
ZIP/Postal code 47907
Country USA
 
Platforms (2)
GPL11221 Illumina Genome Analyzer IIx (Arabidopsis thaliana)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (3)
GSM1199119 idm2_MethylC-Seq_rep1
GSM1199120 idm2_MethylC-Seq_rep2
GSM1199121 idm1idm2_MethylC-Seq
Relations
BioProject PRJNA213861
SRA SRP028366

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49421_RAW.tar 316.1 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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