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| Status |
Public on Jun 10, 2014 |
| Title |
miRQC study, Agilent Platform data |
| Platform organism |
Homo sapiens |
| Sample organisms |
Homo sapiens; Escherichia phage MS2 |
| Experiment type |
Non-coding RNA profiling by array
|
| Summary |
This data is a subset of the miRQC study, submitted for publication in summer of 2013. The purpose of the study was to compare various aspects of miRNA profiling platform performance (reproducibility, sensitivity, accuracy, etc) using a standardized set of samples.
The data included in this submission is a subset of the study data generated on the Agilent miRNA profiling system. The array used was designed to measure all of the human and human viral miRNAs in miRBase 16.0 and the is annotated based on miRBase 18. Analysis for the miRQC study was based only on the human sequences present in miRBase 18 (8 sequences were deleted between 16.0 and 18.0)
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| |
|
| Overall design |
miRNA profiling on a standardized set of 20 samples.
|
| |
|
| Contributor(s) |
Fulmer-Smentek S, D'Andrade P |
| Citation(s) |
24973947 |
| |
| Submission date |
Aug 01, 2013 |
| Last update date |
Oct 29, 2018 |
| Contact name |
Stephanie Fulmer-Smentek |
| Organization name |
Agilent Technologies
|
| Department |
R&D
|
| Street address |
5301 Stevens Creek Blvd
|
| City |
Santa Clara |
| State/province |
CA |
| ZIP/Postal code |
95051 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL15018 |
Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 (Feature Number version) |
|
| Samples (20)
|
|
| Relations |
| BioProject |
PRJNA213966 |
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