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Series GSE49513 Query DataSets for GSE49513
Status Public on Aug 03, 2013
Title Epigenetic regulation of sex determination by the histone demethylase Jmjd1a
Organism Mus musculus
Experiment type Expression profiling by array
Summary Developmental gene expression is defined through cross-talk between the function of transcription factors and epigenetic status including histone modification. Although several known transcription factors play crucial roles in mammalian sex determination, how chromatin regulation contributes to this process is unknown. We observed male-to-female sex reversal in mice lacking the H3K9 demethylase Jmjd1a, and found that Jmjd1a directly regulates expression of the mammalian Y chromosome sex-determining gene Sry, by regulating H3K9me2 marks. These studies reveal a pivotal role for epigenetic regulation in mammalian sex determination, and provide new impetus for identifying additional causes of disorders of sex determination by environmental factors.
 
Overall design Gene expression patterns were measured in gonadal somatic cells of Jmjd1a mutant and control embryos at E11.5. Three biological replicates were performed in each group.
 
Contributor(s) Kuroki S, Matoba S, Akiyoshi M, Matsumura Y, Miyachi H, Mise N, Abe K, Ogura A, Wilhelm D, Koopman P, Nozaki M, Kanai Y, Shinkai Y, Tachibana M
Citation(s) 24009392
Submission date Aug 02, 2013
Last update date Jan 12, 2017
Contact name Shogo Matoba
E-mail(s) shogomatoba@gmail.com
Organization name RIKEN BioResource Research Center
Street address 3-1-1, Koyadai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-0074
Country Japan
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (12)
GSM1200260 Control_Female_rep1
GSM1200261 Control_Female_rep2
GSM1200262 Control_Female_rep3
Relations
BioProject PRJNA214090

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49513_RAW.tar 25.8 Mb (http)(custom) TAR (of TXT)
GSE49513_processed_data_FC2.xlsx.gz 140.3 Kb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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