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| Status |
Public on Sep 15, 2013 |
| Title |
The effect of miR-294 and miR-181 on the transcriptome during OSK reprogramming of MEFs |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
Study designed to determine the immediate effects of supplementing OSK reprogramming with miR-294 or miR-181. MEFs were infected on day 0, and transfected with miR-294, miR-181 or control mimic on day 1. On day 3 RNA was extracted. OSK infected MEFs samples were compared to non-infected MEFs and to fully reprogrammed iPSCs.
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| Overall design |
Performed in biological triplicate, with each sample containing different OSK viral stocks, different preparations of MEFs and independent transfections. Biological triplicate iPSCs represent three independent and clonally expanded iPSC lines. Total RNA collected with Trizol. All processing conducted at the UCLA Neuroscience Genomics Core. MouseRef-8 v2.0 Expression BeadChips.
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| Contributor(s) |
Blelloch R, Judson RL |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 05, 2013 |
| Last update date |
Jun 14, 2018 |
| Contact name |
Robert Blelloch |
| E-mail(s) |
robert.blelloch@ucsf.edu
|
| Phone |
415-476-2839
|
| Organization name |
UCSF
|
| Department |
Urology
|
| Lab |
Blelloch
|
| Street address |
RMB1018, 35 Medical Center Way
|
| City |
San Francisco |
| State/province |
CA |
| ZIP/Postal code |
94143 |
| Country |
USA |
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| Platforms (1) |
| GPL6885 |
Illumina MouseRef-8 v2.0 expression beadchip |
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| Samples (15)
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| Relations |
| BioProject |
PRJNA214243 |
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