 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Apr 29, 2014 |
| Title |
Analysis of the DNA methylome and transcriptome in granulopoiesis reveal timed changes and dynamic enhancer methylation [expression] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
The study investigated the changes in DNA-methylation and gene expression during granulopoiesis. To this end CMP, GMP, PMC and PMN cell populations were isolated by FACS from bonemarrow from healty donors and analysed by CAGE as well as expression and DNA microarrays
|
| |
|
| Overall design |
total RNA was isolated from CMP, GMP, PMC and PMN cells from human bonemarrow from 5 healty donors.
|
| |
|
| Contributor(s) |
Rönnerblad M, Olofsson T, Andersson R, Douagi I, Karimi M, Lehmann S, Ilka H, Sandelin A, Masayohi I, Nago-Sato S, Kawaji H, Lassmann T, Carninici P, Hayashizaki Y, Forrest RR, Ekwall K, Arner E, Lennartsson A |
| Citation(s) |
24671952 |
| |
| Submission date |
Aug 14, 2013 |
| Last update date |
Jan 28, 2016 |
| Contact name |
Karl Ekwall |
| E-mail(s) |
karl.ekwall@ki.se
|
| Phone |
+46 8 6089133
|
| Organization name |
Karolinska Inst
|
| Street address |
Alfred Nobels Alle 7
|
| City |
Stockholm |
| ZIP/Postal code |
S-141 89 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL10904 |
Illumina HumanHT-12 V4.0 expression beadchip (gene symbol) |
|
| Samples (20)
|
|
| Relations |
| BioProject |
PRJNA217514 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE49883_Matrix_non-normalized_GPL10558.txt.gz |
3.6 Mb |
(ftp)(http) |
TXT |
| GSE49883_Matrix_non-normalized_GPL6947.txt.gz |
2.7 Mb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
|
|
|
|
 |
Less...
More...