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| Status |
Public on Apr 01, 2014 |
| Title |
Transcriptome profiling of pig chromosomes regions associated with water holding capacity [DuPi] |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by genome tiling array
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| Summary |
To further characterize genomic regions previously identified which are linked with meat quality traits like drip loss, PH, conductivity and etc., we employed a customary regional tiling array experiment for two pig populations. Total RNA were taken from muscle sample of M. longissimus dorsi of pigs selected from two phenotypic groups graded according to high (HI) and low (LO) drip loss. Hybridization were made in batches, 2 to 3 biological replicates for each sample.
DuPi and PiF1 are code names for the two experimental populations.
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| Overall design |
Total RNA were taken from muscle sample of M. longissimus dorsi of pigs selected from two phenotypic groups graded according to high (HI) and low (LO) drip loss. Hybridization were made in batches, 2 to 3 biological replicates for each sample.
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| Contributor(s) |
Wimmers K |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 13, 2013 |
| Last update date |
Apr 01, 2014 |
| Contact name |
Klaus Wimmers |
| Organization name |
Leibniz Institute for Farm Animal Biology
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| Street address |
Wilhelm-Stahl-Allee 2
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| City |
Dummerstorf |
| State/province |
Mecklenburg-Vorpommern |
| ZIP/Postal code |
18196 |
| Country |
Germany |
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| Platforms (1) |
| GPL17683 |
Agilent-044516 S.Scrofa 1M regional Tiling Array 042564 |
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| Samples (23)
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| This SubSeries is part of SuperSeries: |
| GSE52384 |
Transcriptome profiling of pig chromosomes regions associated with water holding capacity |
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| Relations |
| BioProject |
PRJNA219166 |
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