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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jun 16, 2014 |
Title |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
- Baresic M, Salatino S, Kupr B, van Nimwegen E et al. Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program. Mol Cell Biol 2014 Aug;34(16):2996-3012. PMID: 24912679
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Submission date |
Sep 26, 2013 |
Last update date |
May 15, 2019 |
Contact name |
Christoph Handschin |
Organization name |
Biozentrum, University of Basel
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Street address |
Spitalstrasse 41
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City |
Basel |
ZIP/Postal code |
4056 |
Country |
Switzerland |
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Platforms (3) |
GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
GPL10740 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] |
GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
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Samples (20)
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GSM1240214 |
WCE rep.2 |
GSM1240356 |
GFP OV, biol. rep. 1 |
GSM1240357 |
GFP OV, biol. rep. 2 |
GSM1240358 |
GFP OV, biol. rep. 3 |
GSM1240359 |
PGC1a OV, biol. rep. 1 |
GSM1240360 |
PGC1a OV, biol. rep. 2 |
GSM1240361 |
PGC1a OV, biol. rep. 3 |
GSM1240362 |
Atf3 KD, PGC1a OV, biol. rep. 1 |
GSM1240363 |
Ctrl KD, GFP OV, biol. rep. 1 |
GSM1240364 |
Ctrl KD, PGC1a OV, biol. rep. 1 |
GSM1240365 |
Fos KD, PGC1a OV, biol. rep. 1 |
GSM1240366 |
Jun KD, PGC1a OV, biol. rep. 1 |
GSM1240367 |
Atf3 KD, PGC1a OV, biol. rep. 2 |
GSM1240368 |
Ctrl KD, GFP OV, biol. rep. 2 |
GSM1240369 |
Ctrl KD, PGC1a OV, biol. rep. 2 |
GSM1240370 |
Fos KD, PGC1a OV, biol. rep. 2 |
GSM1240371 |
Jun KD, PGC1a OV, biol. rep. 2 |
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This SuperSeries is composed of the following SubSeries: |
GSE51178 |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [ChIP-Seq] |
GSE51189 |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [microarray: PGC1a_vs_GFP] |
GSE51190 |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [microarray: kD_AP1] |
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Relations |
BioProject |
PRJNA221568 |
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