NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE51195 Query DataSets for GSE51195
Status Public on Sep 27, 2013
Title Comprehensive analysis of gene expression profiles of Spodoptera exigua larvae challenged with Bacillus thuringiensis VIP3A toxin
Organism Spodoptera exigua
Experiment type Expression profiling by array
Summary Host-pathogen interactions result in complex relationship, many aspects of which are not completely understood. Vip proteins, which are Bacillus thuringensis (Bt) insecticidal toxins produced during the vegetative stage, are selectively effective against specific insect pests. This new group of Bt proteins represents an interesting alternative to the classical Bt Cry toxins because current data suggests that they do not share the same mode of action. We have designed and developed a genome-wide microarray for the beet armyworm Spodoptera exigua, a serious lepidopteran pest of many agricultural crops, and used it to better understand how Lepidopteran larvae respond to the treatment with the insecticidal protein Vip3Aa. With this approach, the goal of our study was to evaluate the changes in gene expression levels caused by treatment with sublethal doses (causing 99% growth inhibition) of Vip3Aa at 8 and 24 h after treatment. Results indicated that the toxin provoked a wide transcriptional response, with 19% of unigenes in the microarray responding significantly to treatment. The number of up- and down-regulated unigenes was very similar.. The number of genes whose expression was regulated at 8 h was similar to the number of genes whose expression was regulated after 24 h of treatment. The up-regulated sequences were enriched for genes involved in innate immune response and in pathogen response such as antimicrobial peptides (AMPs) and repat genes. The down-regulated sequences were mainly unigenes with homology to genes involved in metabolism. Genes related to the mode of action of Bt Cry proteins were found, in general, to be slightly overexpressed. The present study is the first genome-wide analysis of the response of lepidopteran insects to Vip3Aa intoxication. An insight into the molecular mechanisms and components related to Vip intoxication will allow designing of more effective management strategies for pest control.
 
Overall design Changes in gene expression levels caused by treatment with sublethal doses (causing 99% growth inhibition) of Vip3Aa were measured at 8 and 24 h after treatment by means of custom Spodoptera exigua microarray. Six to seven larvae were used for each time point and three independent experiments were performed at each time point.
 
Contributor(s) Bel Y, Jakubowska AK, Costa J, Herrero S, Escriche B
Citation(s) 24312604
Submission date Sep 26, 2013
Last update date Aug 08, 2019
Contact name Agata K Jakubowska
E-mail(s) agatajak@gmail.com
Phone 34662262810
Organization name University of Valencia
Department Genetics
Street address Dr. Moliner 50
City Burjassot
State/province Valencia
ZIP/Postal code 46-100
Country Spain
 
Platforms (1)
GPL17775 Agilent-026862 SexiArray_v1.0 array (Probe Name version)
Samples (9)
GSM1240404 Control_rep1
GSM1240405 Control_rep2
GSM1240406 Control_rep3
Relations
BioProject PRJNA221575

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51195_RAW.tar 62.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap