|
| Status |
Public on Sep 08, 2014 |
| Title |
Comparative transcriptomics of Mycobacterium bovis and Mycobacterium marinum |
| Organisms |
Mycobacterium tuberculosis variant bovis; Mycobacterium marinum |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
Related surrogate species are often used to study the molecular basis of pathogenicity of a pathogen on the basis of a shared set of biological features generally attributable to a shared core genome consisting of orthologous genes. An important and understudied aspect, however, is the extent to which regulatory features affecting the expression of such shared genes are present in both species. Here we report on an analysis of whole transcriptome maps for an important member of the TB complex Mycobacterium bovis and a closely related model organism for studying mycobacterial pathogenicity Mycobacterium marinum.
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| |
|
| Overall design |
Predict transcription start site
|
| |
|
| Contributor(s) |
Tong P, Loftus B |
| Citation(s) |
25096875 |
| BioProject |
PRJNA217834 |
| |
| Submission date |
Oct 30, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Robin Allshire |
| E-mail(s) |
Robin.Allshire@ed.ac.uk
|
| Organization name |
The University of Edinburgh
|
| Lab |
Allshire Lab
|
| Street address |
Max Born Cresent
|
| City |
Edinburgh |
| State/province |
Midlothian |
| ZIP/Postal code |
EH9 3BF |
| Country |
United Kingdom |
| |
|
| Platforms (2) |
| GPL17861 |
Illumina Genome Analyzer II (Mycobacterium bovis) |
| GPL17862 |
Illumina Genome Analyzer II (Mycobacterium marinum) |
|
| Samples (8)
|
|
| Relations |
| SRA |
SRP032368 |
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