|
| Status |
Public on Feb 08, 2014 |
| Title |
MicroRNAs in a multicellular green alga Volvox carteri |
| Organism |
Volvox carteri |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
We identified 174 miRNAs expressed in Volvox carteri. Some of Volvox miRNAs are highly enriched in gonidia or somatic cells. Subsequently, we predicted the targets of Volvox miRNAs and found many of target genes were regulated through mRNA degradation. Conservation analysis suggests the common origin of miRNA between Volvox and Chlamydomonas and high frequency of birth and death of Volvox miRNAs.
|
| |
|
| Overall design |
Identification of miRNAs in multicellular green Volvox
|
| |
|
| Contributor(s) |
Li J, Wu Y, Qi Y |
| Citation(s) |
24369344 |
| |
| Submission date |
Nov 13, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Yijun Qi |
| E-mail(s) |
qiyijun@biomed.tsinghua.edu.cn
|
| Organization name |
Tsinghua University
|
| Department |
School of Life Sciences
|
| Lab |
Qi lab
|
| Street address |
Biotech. Building
|
| City |
Beijing |
| State/province |
Bejing |
| ZIP/Postal code |
100084 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL17926 |
Illumina Genome Analyzer IIx (Volvox carteri) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA227453 |
| SRA |
SRP032973 |
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