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Series GSE52695 Query DataSets for GSE52695
Status Public on Oct 20, 2016
Title RNA-seq analysis of Hypoxia and Normoxia cultured cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Purpose: To study differential mRNA and precursor miRNA expression under hypoxia exposure in cancer cells. We treated ovarian cancer cell line A2780 under hypoxia condition at different time points. Normoxi acultured cells at corresponding time point were used as controls.
 
Overall design A2780 cancer cells, cultured under hypoxia and normoxia. Time points tested: 6hr, 48hr, 6days.
 
Contributor(s) Sood AK, Rupaimoole R
Citation(s) 25351346
Submission date Nov 25, 2013
Last update date May 15, 2019
Contact name anil k sood
E-mail(s) asood@mdanderson.org
Phone 7137455266
Organization name UT MD Anderson Cancer Center
Department Gyn Oncology and Rep Medicine
Street address 7777 knight road, unit 173
City HOUSTON
State/province TEXAS
ZIP/Postal code 77054
Country USA
 
Platforms (1)
GPL16288 AB 5500xl Genetic Analyzer (Homo sapiens)
Samples (24)
GSM1274253 Normoxia_6hr (total RNA)_1
GSM1274254 Normoxia_6hr (total RNA)_2
GSM1274255 Hypoxia_6hr (total RNA)_3
This SubSeries is part of SuperSeries:
GSE52744 Hypoxia Mediated Downregulation of miRNA Biogenesis Leads to Increased Tumor Progression
Relations
BioProject PRJNA229843
SRA SRP033296

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52695_Ovarian_Precursor_microRNAs_RPKM_Values.txt.gz 13.9 Kb (ftp)(http) TXT
GSE52695_Ovarian_RefSeq_RPKM_Values.txt.gz 922.0 Kb (ftp)(http) TXT
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Processed data are available on Series record
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