|
| Status |
Public on Jun 01, 2014 |
| Title |
eRNA: A graphic user interface-based tool for RNA sequencing data analysis [microRNA-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
we performed RNA sequencing analysis using 7 human plasma samples and evaluated efficiency and accuracy of eRNA on miRNA-seq data analysis.
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| |
|
| Overall design |
We sequenced microRNAs from the 7 human tissue samples with replicates (A1/A8, B2/B9, C3/C10, D4/D11, E5/E12, F6/F13, G7/G14) using NEBNext Multiplex Small RNA library Prep Set from New England Biolab (NEB). After that, we identified miRNAs in these plasma samples against known human matured miRNAs.
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| |
|
| Contributor(s) |
Yuan T, Huang X, Wang L |
| Citation(s) |
24593312 |
| Submission date |
Dec 18, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Liang Wang |
| E-mail(s) |
liwang@mcw.edu
|
| Phone |
414-955-2574
|
| Organization name |
Medical College of Wisconsin
|
| Department |
Pathology
|
| Street address |
8701 Watertown Plank Rd.
|
| City |
Milwaukee |
| State/province |
Wisconsin |
| ZIP/Postal code |
53226 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (14)
|
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| This SubSeries is part of SuperSeries: |
| GSE53452 |
eRNA: A graphic user interface-based tool for RNA sequencing data analysis |
|
| Relations |
| BioProject |
PRJNA232039 |
| SRA |
SRP034590 |
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