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Series GSE53974 Query DataSets for GSE53974
Status Public on Jan 11, 2014
Title Extracellular Vesicles in Luminal Fluid of the Ovine Uterus
Organism Ovis aries
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Exosomes/microvesicles (hereafter referred to as extracellular vesicles) were isolated from the ULF of day 14 cyclic and pregnant ewes using ExoQuick-TC. Extracellular vesicle RNA was pooled (n=4 per status) and analyzed for small RNAs by sequencing on the Ion Torrent PGM platform and analysis with CLC Genomics Workbench small RNA workflow based on the miRBase (Release 19) Bos taurus database.
 
Overall design Small RNA analysis of day 14 uterine luminal fluid extracellular vesicles isolated from pregnant and cyclic ewes.
 
Contributor(s) Burns GW, Brooks KM, Wildung MR, Navakanitworakul R, Christenson LK, Spencer TE
Citation(s) 24614226
Submission date Jan 10, 2014
Last update date May 15, 2019
Contact name Thomas Spencer
E-mail(s) spencerte@missouri.edu
Organization name University of Missouri
Department Animal Sciences
Lab ASRC 158
Street address 920 East Campus Drive
City Columbia
State/province MO
ZIP/Postal code 65211
Country USA
 
Platforms (1)
GPL18156 Ion Torrent PGM (Ovis aries)
Samples (2)
GSM1304706 D14_Pregnant_SmallRNA
GSM1304707 D14_Cyclic_SmallRNA
Relations
BioProject PRJNA234100
SRA SRP035306

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53974_15-55_Mature_PvsC.xls.gz 8.8 Kb (ftp)(http) XLS
GSE53974_15-55_Mature_miRNA_ALL.xls.gz 15.4 Kb (ftp)(http) XLS
GSE53974_RAW.tar 10.0 Kb (http)(custom) TAR (of XLS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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