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Series GSE54958 Query DataSets for GSE54958
Status Public on Feb 16, 2015
Title Expression profiling in proliferative thyroid lesions of different histologies and normal thyroid tissue
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Experiment a) Establishment of expression profiles in conventional papillary thyroid carcinomas (PTCs) with a BRAF mutation vs. PTCs without a BRAF mutation and using normal thyroid (TN) specimens as reference.
Experiment b) Establishment of expression profiles in follicular adenomas (FAs) of the thyroid and follicular variant of papillary thyroid carcinomas (FVPTCs).
 
Overall design We extracted DNA from specimens and performed mutational analysis in malignant lesions and extracted RNA that was processed and hybridized to Affymetrix microarrays.
 
Contributor(s) Schulten H, Karim S
Citation(s) 25923053, 32603365
Submission date Feb 12, 2014
Last update date Jul 13, 2020
Contact name Hans-Juergen Schulten
E-mail(s) hschulten@kau.edu.sa
Phone +966534355430
Organization name King Abdulaziz University
Department Center of Excellence in Genomic Medicine Research
Lab Affymetrix Service Unit
Street address P.O. Box 80216
City Jeddah
ZIP/Postal code 21589
Country Saudi Arabia
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (45)
GSM1327231 PTC BRAF wt 1
GSM1327232 PTC BRAF wt 2
GSM1327233 PTC BRAF wt 3
Relations
BioProject PRJNA238145

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54958_RAW.tar 182.9 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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