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Series GSE55047 Query DataSets for GSE55047
Status Public on May 20, 2015
Title Genome-wide changes in DNase-hypersensitivity during osteoblastogenesis reveal differential usage of DNA motifs and define novel cis-regulatory regions that control gene expression during differentiation
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 25120271
Submission date Feb 14, 2014
Last update date May 15, 2019
Contact name Jonathan AR Gordon
E-mail(s) Jonathan.A.Gordon@uvm.edu
Organization name University of Vermont
Department Biochemistry
Street address 89 Beaumont Ave Given E209
City Burlington
State/province VT
ZIP/Postal code 05405
Country USA
 
Platforms (1)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (7)
GSM1328456 MC3T3-E1 cells_Ctcf_day0_ChIP-Seq
GSM1328457 MC3T3-E1 cells_Ctcf_day9_ChIP-Seq
GSM1328458 MC3T3-E1 cells_Ctcf_day28_ChIP-Seq
This SuperSeries is composed of the following SubSeries:
GSE55045 Genome-wide changes in DNase-hypersensitivity during osteoblastogenesis reveal differential usage of DNA motifs and define novel cis-regulatory regions that control gene expression during differentiation [ChIP-Seq]
GSE55046 Genome-wide changes in DNase-hypersensitivity during osteoblastogenesis reveal differential usage of DNA motifs and define novel cis-regulatory regions that control gene expression during differentiation [DNase-Seq]
Relations
BioProject PRJNA238320

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55047_RAW.tar 11.3 Gb (http)(custom) TAR (of BED, BIGWIG, BW)
SRA Run SelectorHelp

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