GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE55318 Query DataSets for GSE55318
Status Public on Jun 03, 2014
Title Transcript data affected by constitutive expression of VvMYBPAR in Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Constitutive expression of VvMYBPAR in Arabidopsis was found to accumulate proanthocyanidins when the plants were grown on sucrose-supplemented media to induce anthocyanins. To identify the putative targets of VvMYBPAR, the transcriptome analysis of the transgenic lines which highly express VvMYBPAR was carried out using NimbleGen microarray.
Overall design Three transgenic lines in which VvMYBPAR were constitutively expressed under the control of 35S promoter vs. empty vector transformants were compared.
Contributor(s) Koyama K, Tanaka N
Citation(s) 24860184
Submission date Feb 25, 2014
Last update date Apr 28, 2016
Contact name Kazuya Koyama
Phone +81-82-420-0812
Organization name National Research Institute of Brewing
Department Fundamental Reesearch Division
Street address 3-7-1, Kagamiyama
City Higashi-Hiroshima
State/province Hiroshima
ZIP/Postal code 739-0046
Country Japan
Platforms (1)
GPL13970 NimbleGen Arabidopsis thaliana Gene Expression 12x135K Array [100718_Athal_TAIR9_exp; SEQ_ID]
Samples (6)
GSM1334042 MYBPAR expressing Arabidopsis_line PAR18-2
GSM1334043 MYBPAR expressing Arabidopsis_line PAR9-2
GSM1334044 MYBPAR expressing Arabidopsis_line PAR36-4
This SubSeries is part of SuperSeries:
GSE55474 Functional characterization of a new grapevine MYB transcription factor and regulation of proanthocyanidin biosynthesis in grapes
BioProject PRJNA239313

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55318_RAW.tar 25.3 Mb (http)(custom) TAR (of CALLS, PAIR)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap